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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs57986232 chr4:3139792 GTTCC/G 0.000151 483 17.13 14.03 14.93 KM Plot
THCA rs5798772 chr12:65562842 A/AT 0 473 16.2 15.27 10.77 KM Plot
THCA rs58023472 chr12:49303910 G/T 0.000325 485 16.8 16.05 13.93 KM Plot
THCA rs58050348 chr14:24739363 A/AG 1.21E-6 485 15.9 15.63 17.13 KM Plot
THCA rs58109657 chr15:41471750 A/G 0.00016 489 17.33 15.9 15.47 KM Plot
THCA rs58183883 chr12:109489606 C/T 6.19E-5 487 15.9 16.23 12.1 KM Plot
THCA rs58187971 chr10:81848189 G/GTT 0.000145 488 15.97 16.07 9.77 KM Plot
THCA rs58215219 chr1:91770190 ATT/A 7.37E-6 482 17.77 17.03 15.48 KM Plot
THCA rs58259077 chr3:72994890 G/A 4.2E-5 479 16.63 14.9 14.3 KM Plot
THCA rs5831325 chr2:55080588 TA/T 0.000233 469 17.18 16.4 15.77 KM Plot
THCA rs58317752 chr10:104799267 T/A 5.02E-9 490 15.23 17.68 32.1 KM Plot
THCA rs58322431 chr1:184065438 C/T 2.35E-6 480 15.65 17.58 25.93 KM Plot
THCA rs58324890 chr6:167577163 G/A 0.000213 489 16.27 14.63 12.72 KM Plot
THCA rs58333075 chr10:11829030 G/A 2.97E-13 471 16.07 14.8 23.67 KM Plot
THCA rs58405709 chr2:201950456 A/AAT 0.000138 487 16.13 15.77 4.33 KM Plot